TSSr

TSSr: an R/Bioconductor package for analysis of transcription start sites

TSSr analyzes transcription start sites (TSSs) and core promoters from 5′ end sequencing data, including CAGE, nAnT-iCAGE, SLIC-CAGE, NanoCAGE, TSS-seq, TIF-seq, TL-seq, PRO-Cap, and GRO-Cap/5′GRO-seq.

View source code and documentation on GitHub

TSSr logo Overview of TSSr analysis steps

Example data for TSSr